Department of Medical Microbiology and Immunology

Research Output

2015

Immediate and ongoing detection of prions in the blood of hamsters and deer following oral, nasal, or blood inoculations

Elder, A. M., Henderson, D. M., Nalls, A. V., Hoover, E. A., Kincaid, A. E., Bartz, J. C. & Mathiason, C. K., 2015, In : Journal of Virology. 89, 14, p. 7421-7424 4 p.

Research output: Contribution to journalArticle

22 Scopus citations

Investigation of bovine serum albumin (BSA) attachment onto self-assembled monolayers (SAMs) using combinatorial quartz crystal microbalance with dissipation (QCM-D) and spectroscopic ellipsometry (SE)

Phan, H. T. M., Bartelt-Hunt, S., Rodenhausen, K. B., Schubert, M. & Bartz, J. C., Oct 27 2015, In : PloS one. 10, 10, 0141282.

Research output: Contribution to journalArticle

42 Scopus citations

Microbial typing by matrix-assisted laser desorption ionization-time of flight mass spectrometry: Do we need guidance for data interpretation?

Spinali, S., Van Belkum, A., Goering, R. V., Girard, V., Welker, M., Van Nuenen, M., Pincus, D. H., Arsac, M. & Durand, G., Mar 1 2015, In : Journal of clinical microbiology. 53, 3, p. 760-765 6 p.

Research output: Contribution to journalReview article

58 Scopus citations

Mitigation of Prion Infectivity and Conversion Capacity by a Simulated Natural Process—Repeated Cycles of Drying and Wetting

Yuan, Q., Eckland, T., Telling, G., Bartz, J. & Bartelt-Hunt, S., Jan 1 2015, In : PLoS pathogens. 11, 2, e1004638.

Research output: Contribution to journalArticle

7 Scopus citations

Nanoformulations of Rilpivirine for Topical Pericoital and Systemic Coitus-Independent Administration Efficiently Prevent HIV Transmission

Kovarova, M., Council, O. D., Date, A. A., Long, J. M., Nochii, T., Belshan, M., Shibata, A., Vincent, H., Baker, C. E., Thayer, W. O., Kraus, G., Lachaud-Durand, S., Williams, P., Destache, C. J. & Garcia, J. V., Aug 1 2015, In : PLoS pathogens. 11, 8, e1005075.

Research output: Contribution to journalArticle

43 Scopus citations

Nasal associated lymphoid tissue of the Syrian golden hamster expresses high levels of PrPC

Clouse, M. D., Shikiya, R. A., Bartz, J. C. & Kincaid, A. E., Feb 2 2015, In : PloS one. 10, 2, e0117935.

Research output: Contribution to journalArticle

3 Scopus citations

Polyploidy can drive rapid adaptation in yeast

Selmecki, A., Maruvka, Y. E., Richmond, P. A., Guillet, M., Shoresh, N., Sorenson, A. L., De, S., Kishony, R., Michor, F., Dowell, R. & Pellman, D., Mar 19 2015, In : Nature. 519, 7543, p. 349-351 3 p.

Research output: Contribution to journalArticle

169 Scopus citations

ST2249-MRSA-III: A second major recombinant methicillin-resistant Staphylococcus aureus clone causing healthcare infection in the 1970s

Nimmo, G. R., Steen, J. A., Monecke, S., Ehricht, R., Slickers, P., Thomas, J. C., Appleton, S., Goering, R. V., Robinson, D. A. & Coombs, G. W., May 1 2015, In : Clinical Microbiology and Infection. 21, 5, p. 444-450 7 p.

Research output: Contribution to journalArticle

7 Scopus citations
5 Scopus citations

Thermosensitive gel containing cellulose acetate phthalate-efavirenz combination nanoparticles for prevention of HIV-1 infection

Date, A. A., Shibata, A., McMullen, E., La Bruzzo, K., Bruck, P., Belshan, M., Zhou, Y. & Destache, C. J., Mar 1 2015, In : Journal of Biomedical Nanotechnology. 11, 3, p. 416-427 12 p.

Research output: Contribution to journalArticle

23 Scopus citations

Upregulation of KSRP by miR-27b provides IFNγ-induced post-transcriptional regulation of CX3CL1 in liver epithelial cells

Xia, Z., Lu, Y., Li, X., Mao, T., Chen, X. M. & Zhou, R., Dec 3 2015, In : Scientific Reports. 5, 17590.

Research output: Contribution to journalArticle

7 Scopus citations

VprBP is required for efficient editing and selection of Igκ+ B cells, but is dispensable for Igλ+ and marginal zone B cell maturation and selection

Palmer, V. L., Aziz-Seible, R., Kassmeier, M. D., Rothermund, M., Perry, G. A. & Swanson, P. C., Aug 15 2015, In : Journal of Immunology. 195, 4, p. 1524-1537 14 p.

Research output: Contribution to journalArticle

2 Scopus citations
2014

Alterations in the nuclear proteome of HIV-1 infected T-cells

DeBoer, J., Jagadish, T., Haverland, N. A., Madson, C. J., Ciborowski, P. & Belshan, M., Nov 1 2014, In : Virology. 468, p. 409-420 12 p.

Research output: Contribution to journalArticle

10 Scopus citations

A novel, broadly applicable approach to isolation of fungi in diverse growth media

Smithee, S., Tracy, S., Drescher, K. M., Pitz, L. A. & McDonald, T., Oct 2014, In : Journal of Microbiological Methods. 105, p. 155-161 7 p.

Research output: Contribution to journalArticle

3 Scopus citations

Bacterial whole-genome sequencing revisited: Portable, scalable, and standardized analysis for typing and detection of virulence and antibiotic resistance genes

Leopold, S. R., Goering, R. V., Witten, A., Harmsen, D. & Mellmann, A., Jul 2014, In : Journal of clinical microbiology. 52, 7, p. 2365-2370 6 p.

Research output: Contribution to journalArticle

119 Scopus citations

Cryptosporidium parvum induces SIRT1 expression in host epithelial cells through downregulating let-7i

Xie, H., Lei, N., Gong, A. Y., Chen, X. M. & Hu, G., Aug 2014, In : Human Immunology. 75, 8, p. 760-765 6 p.

Research output: Contribution to journalArticle

12 Scopus citations

Emergence of carbapenem resistance due to the novel insertion sequence is Pa8 in pseudomonas aeruginosa

Fowler, R. C. & Hanson, N. D., Apr 10 2014, In : PloS one. 9, 3, e91299.

Research output: Contribution to journalArticle

16 Scopus citations

Genetics, biomarkers, hereditary cancer syndrome diagnosis, heterogeneity and treatment: a review

Lynch, H. T., Drescher, K. M., Knezetic, J. & Lanspa, S. J., Sep 1 2014, In : Current Treatment Options in Oncology. 15, 3, p. 429-442 14 p.

Research output: Contribution to journalReview article

18 Scopus citations

Identification and characterization of linezolid-resistant cfr-positive staphylococcus aureus USA300 Isolates from a new york city medical center

Locke, J. B., Zuill, D. E., Scharn, C. R., Deane, J., Sahm, D. F., Goering, R. V., Jenkins, S. G. & Shaw, K. J., Nov 1 2014, In : Antimicrobial agents and chemotherapy. 58, 11, p. 6949-6952 4 p.

Research output: Contribution to journalArticle

14 Scopus citations

Immunology of cryptosporidiosis

Hu, G., Feng, Y., O’Hara, S. P. & Chen, X. M., Jan 1 2014, Cryptosporidium: Parasite and Disease. Springer-Verlag Wien, p. 423-454 32 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Scopus citations

Linezolid-resistant Staphylococcus aureus strain 1128105, the first known clinical isolate possessing the cfr multidrug resistance gene

Locke, J. B., Zuill, D. E., Scharn, C. R., Deane, J., Sahm, D. F., Denys, G. A., Goering, R. V. & Shawa, K. J., Nov 1 2014, In : Antimicrobial agents and chemotherapy. 58, 11, p. 6592-6598 7 p.

Research output: Contribution to journalArticle

16 Scopus citations
28 Scopus citations
11 Scopus citations

Non-coding RNAs in epithelial immunity to Cryptosporidium infection

Zhou, R., Feng, Y. & Chen, X. M., Sep 2 2014, In : Parasitology. 141, 10, p. 1233-1243 11 p.

Research output: Contribution to journalReview article

9 Scopus citations

Prion diseases

Belay, E. D. & Bartz, J. C., Jun 1 2014, Viral Infections of Humans: Epidemiology and Control. Springer US, p. 1165-1186 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Prion formation, but not clearance, is supported by protein misfolding cyclic amplification

Shikiya, R. A., Eckland, T. E., Young, A. J. & Bartz, J. C., Nov 1 2014, In : Prion. 8, 6, p. 415-420 6 p.

Research output: Contribution to journalArticle

7 Scopus citations

Pulsed field gel electrophoresis of Staphylococcus epidermidis

Goering, R. V. & Fey, P. D., 2014, Staphylococcus Epidermidis: Methods and Protocols. Humana Press Inc., p. 55-60 6 p. (Methods in Molecular Biology; vol. 1106).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations

Pulsed field gel electrophoresis of Staphylococcus epidermidis

Goering, R. V. & Fey, P. D., 2014, Methods in Molecular Biology. Vol. 1106. p. 55-60 6 p. (Methods in Molecular Biology; vol. 1106).

Research output: Chapter in Book/Report/Conference proceedingChapter

Pyruvate protects pathogenic spirochetes from H2O2 killing

Troxel, B., Zhang, J. J., Bourret, T. J., Zeng, M. Y., Blum, J., Gherardini, F., Hassan, H. M. & Yang, X. F., Jan 2 2014, In : PloS one. 9, 1, e84625.

Research output: Contribution to journalArticle

25 Scopus citations

Strain types and antimicrobial resistance patterns of Clostridium difficile isolates from the United States, 2011 to 2013

Tickler, I. A., Goering, R. V., Whitmore, J. D., Lynn, A. N. W., Persing, D. H. & Tenover, F. C., Jul 2014, In : Antimicrobial agents and chemotherapy. 58, 7, p. 4214-4218 5 p.

Research output: Contribution to journalArticle

78 Scopus citations

Whole genome mapping of the first reported case of KPC-2-positive Klebsiella pneumoniae ST258 in Nebraska

Fowler, R. C., Scharn, C. R., Ali, M. A., Cavalieri, S. J., Goering, R. V. & Hanson, N. D., Jul 2014, In : Diagnostic Microbiology and Infectious Disease. 79, 3, p. 384-386 3 p.

Research output: Contribution to journalArticle

1 Scopus citations
2013

Accelerated progression of chronic lymphocytic leukemia in Em-TCL1 mice expressing catalytically inactive RAG1

Nganga, V. K., Palmer, V. L., Naushad, H., Kassmeier, M. D., Anderson, D. K., Perry, G. A., Schabla, N. M. & Swanson, P. C., May 9 2013, In : Blood. 121, 19, p. 3855-3866 12 p.

Research output: Contribution to journalArticle

17 Scopus citations
37 Scopus citations

Associations between dru Types and SCCmec Cassettes

Bartels, M. D., Boye, K., Oliveira, D. C., Worning, P., Goering, R. & Westh, H., Apr 25 2013, In : PloS one. 8, 4, e61860.

Research output: Contribution to journalArticle

11 Scopus citations

Behavior of Prions in the Environment: Implications for Prion Biology

Bartelt-Hunt, S. L. & Bartz, J. C., Feb 2013, In : PLoS pathogens. 9, 2, e1003113.

Research output: Contribution to journalArticle

14 Scopus citations

Characterization of a novel composite staphylococcal cassette chromosome mec (SCCmec-SCCcad/ars/cop) in the neonatal sepsis-associated Staphylococcus capitis pulsotype NRCS-A

Simões, P. M., Rasigade, J. P., Lemriss, H., Butin, M., Ginevra, C., Lemriss, S., Goering, R. V., Ibrahimi, A., Picaud, J. C., El Kabbaj, S., Vandenesch, F. & Laurent, F., Dec 1 2013, In : Antimicrobial agents and chemotherapy. 57, 12, p. 6354-6357 4 p.

Research output: Contribution to journalArticle

15 Scopus citations

Daptomycin non-susceptible Staphylococcus aureus at a US medical centre

Velazquez, A., Deryke, C. A., Goering, R., Hoover, V. & Wallace, M. R., Dec 2013, In : Clinical Microbiology and Infection. 19, 12, p. 1169-1172 4 p.

Research output: Contribution to journalArticle

9 Scopus citations

Effect of drug treatment options on the mobility and expression of blakpc

Roth, A. L., Lister, P. D. & Hanson, N. D., Dec 1 2013, In : Journal of Antimicrobial Chemotherapy. 68, 12, p. 2779-2785 7 p., dkt280.

Research output: Contribution to journalArticle

2 Scopus citations

From theory to practice: Molecular strain typing for the clinical and public health setting

Goering, R. V., Köck, R., Grundmann, H., Werner, G. & Friedrich, A. W., Jan 24 2013, In : Eurosurveillance. 18, 4

Research output: Contribution to journalArticle

Open Access
14 Scopus citations

Histone Deacetylases and NF-kB Signaling Coordinate Expression of CX3CL1 in Epithelial Cells in Response to Microbial Challenge by Suppressing miR-424 and miR-503

Zhou, R., Gong, A. Y., Chen, D., Miller, R. E., Eischeid, A. N. & Chen, X. M., May 28 2013, In : PloS one. 8, 5, e65153.

Research output: Contribution to journalArticle

42 Scopus citations

HIV Tat Induces Expression of ICAM-1 in HUVECs: Implications for miR-221/-222 in HIV-Associated Cardiomyopathy

Duan, M., Yao, H., Hu, G., Chen, X. M., Lund, A. K. & Buch, S., Mar 28 2013, In : PloS one. 8, 3, e60170.

Research output: Contribution to journalArticle

44 Scopus citations

Identification of low molecular weight nuclear complexes containing integrase during the early stages of HIV-1 infection

Gérard, A., Soler, N., Ségéral, E., Belshan, M. & Emiliani, S., Feb 1 2013, In : Retrovirology. 10, 1, 13.

Research output: Contribution to journalArticle

8 Scopus citations

In vitro detection of prionemia in TSE-infected cervids and hamsters

Elder, A. M., Henderson, D. M., Nalls, A. V., Wilham, J. M., Caughey, B. W., Hoover, E. A., Kincaid, A. E., Bartz, J. C. & Mathiason, C. K., Nov 1 2013, In : PloS one. 8, 11, e80203.

Research output: Contribution to journalArticle

58 Scopus citations

Molecular typing techniques: State of the art

Goering, R. V., Jan 1 2013, Advanced Techniques in Diagnostic Microbiology. Springer US, Vol. 9781461439707. p. 239-261 23 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Multicenter evaluation of the verigene clostridium difficile nucleic acid assay

Carroll, K. C., Buchan, B. W., Tan, S., Stamper, P. D., Riebe, K. M., Pancholi, P., Kelly, C., Rao, A., Fader, R., Cavagnolo, R., Watson, W., Goering, R. V., Trevino, E. A., Weissfeld, A. S. & Ledeboer, N. A., Dec 1 2013, In : Journal of clinical microbiology. 51, 12, p. 4120-4125 6 p.

Research output: Contribution to journalArticle

24 Scopus citations

Phenethyl isothiocyanate inhibits androgen receptor-regulated transcriptional activity in prostate cancer cells through suppressing PCAF

Yu, C., Gong, A. Y., Chen, D., Solelo Leon, D., Young, C. Y. & Chen, X. M., Oct 1 2013, In : Molecular Nutrition and Food Research. 57, 10, p. 1825-1833 9 p.

Research output: Contribution to journalArticle

22 Scopus citations

Prions in the environment

Bartelt-Hunt, S. L., Bartz, J. C. & Saunders, S. E., Nov 1 2013, Animals, Humans and the Environment. Springer New York, Vol. 2. p. 89-101 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter