• 2759 Citations
  • 26 h-Index
19952020

Research output per year

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Research Output

2020

Sensational MicroRNAs: Neurosensory Roles of the MicroRNA-183 Family

Banks, S. A., Pierce, M. L. & Soukup, G. A., Jan 1 2020, In : Molecular Neurobiology. 57, 1, p. 358-371 14 p.

Research output: Contribution to journalReview article

3 Scopus citations
2018

A mouse model of MIR-96, MIR-182 and MIR-183 misexpression implicates MIRNAs in cochlear cell fate and homeostasis

Weston, M., Tarang, S., Pierce, M. L., Pyakurel, U., Rocha-Sanchez, S., McGee, J. A., Walsh, E. J. & Soukup, G., Dec 1 2018, In : Scientific Reports. 8, 1, 3569.

Research output: Contribution to journalArticle

4 Scopus citations
2017

Transcriptome-wide comparison of the impact of Atoh1 and miR-183 family on pluripotent stem cells and multipotent otic progenitor cells

Ebeid, M., Sripal, P., Pecka, J., Beisel, K. W., Kwan, K. & Soukup, G. A., Jul 2017, In : PloS one. 12, 7, e0180855.

Research output: Contribution to journalArticle

4 Scopus citations
2014

Characterization of transcriptomes of cochlear inner and outer hair cells

Liu, H., Pecka, J. L., Zhang, Q., Soukup, G. A., Beisel, K. W. & He, D. Z. Z., 2014, In : Journal of Neuroscience. 34, 33, p. 11085-11095 11 p.

Research output: Contribution to journalArticle

86 Scopus citations

Conditional and target-specific transgene induction through RNA replacement using an allosteric trans-splicing ribozyme

Kim, J., Jeong, S., Kertsburg, A., Soukup, G. A. & Lee, S. W., Nov 21 2014, In : ACS Chemical Biology. 9, 11, p. 2491-2495 5 p.

Research output: Contribution to journalArticle

6 Scopus citations

Identifying MicroRNAs involved in aging of the lateral wall of the cochlear duct

Zhang, Q., Liu, H., Soukup, G. A. & He, D. Z. Z., Nov 18 2014, In : PloS one. 9, 11, 0112857.

Research output: Contribution to journalArticle

5 Scopus citations
2013

Identifying MicroRNAs Involved in Degeneration of the Organ of Corti during Age-Related Hearing Loss

Zhang, Q., Liu, H., McGee, J. A., Walsh, E. J., Soukup, G. A. & He, D. Z. Z., Apr 30 2013, In : PloS one. 8, 4, e62786.

Research output: Contribution to journalArticle

45 Scopus citations

Preface

Soukup, G. A., Jan 1 2013, Catalytic RNA. Elsevier B.V., 1 p. (Progress in Molecular Biology and Translational Science; vol. 120).

Research output: Chapter in Book/Report/Conference proceedingForeword/postscript

Preface. Catalytic RNA.

Soukup, G. A., Dec 1 2013, In : Progress in molecular biology and translational science. 120, p. xi

Research output: Contribution to journalEditorial

2012

Conditional deletion of the human ortholog gene Dicer1 in Pax2-Cre expression domain impairs orofacial development

Barritt, L. C., Miller, J. M., Scheetz, L. R., Gardner, K., Pierce, M. L., Soukup, G. A. & Rocha-Sanchez, S. M., Sep 1 2012, In : Indian Journal of Human Genetics. 18, 3, p. 310-319 10 p.

Research output: Contribution to journalArticle

13 Scopus citations
2011

MicroRNA-183 family expression in hair cell development and requirement of microRNAs for hair cell maintenance and survival

Weston, M. D., Pierce, M. L., Jensen-Smith, H. C., Fritzsch, B., Rocha-Sanchez, S., Beisel, K. W. & Soukup, G. A., Apr 1 2011, In : Developmental Dynamics. 240, 4, p. 808-819 12 p.

Research output: Contribution to journalArticle

76 Scopus citations

MicroRNA-221 controls expression of intercellular adhesion molecule-1 in epithelial cells in response to Cryptosporidium parvum infection

Gong, A. Y., Hu, G., Zhou, R., Liu, J., Feng, Y., Soukup, G. A. & Chen, X. M., Feb 7 2011, In : International Journal for Parasitology. 41, 3, p. 397-403 7 p.

Research output: Contribution to journalArticle

31 Scopus citations

The role of sensory organs and the forebrain for the development of the craniofacial shape as revealed by Foxg1-cre-mediated microRNA loss

Kersigo, J., D'Angelo, A., Gray, B. D., Soukup, G. A. & Fritzsch, B., Apr 1 2011, In : Genesis. 49, 4, p. 326-341 16 p.

Research output: Contribution to journalArticle

47 Scopus citations
2010

Analysis of metal ion dependence in glmS ribozyme self-cleavage and coenzyme binding

Klawuhn, K., Jansen, J. A., Souchek, J., Soukup, G. A. & Soukup, J. K., Dec 10 2010, In : ChemBioChem. 11, 18, p. 2567-2571 5 p.

Research output: Contribution to journalArticle

18 Scopus citations
2009
3 Scopus citations

Little but loud: Small RNAs have a resounding affect on ear development

Soukup, G. A., Jun 24 2009, In : Brain Research. 1277, p. 104-114 11 p.

Research output: Contribution to journalReview article

30 Scopus citations

MicroRNA-513 regulates B7-H1 translation and is involved in IFN-γ-induced B7-H1 expression in cholangiocytes

Gong, A. Y., Zhou, R., Hu, G., Li, X., Splinter, P. L., O'Hara, S. P., LaRusso, N. F., Soukup, G. A., Dong, H. & Chen, X. M., Feb 1 2009, In : Journal of Immunology. 182, 3, p. 1325-1333 9 p.

Research output: Contribution to journalArticle

Open Access
134 Scopus citations

MicroRNAs sound off

Weston, M. D. & Soukup, G. A., Jun 8 2009, In : Genome Medicine. 1, 6, gm59.

Research output: Contribution to journalShort survey

7 Scopus citations

Residual microRNA expression dictates the extent of inner ear development in conditional Dicer knockout mice

Soukup, G. A., Fritzsch, B., Pierce, M. L., Weston, M. D., Jahan, I., McManus, M. T. & Harfe, B. D., Apr 15 2009, In : Developmental Biology. 328, 2, p. 328-341 14 p.

Research output: Contribution to journalArticle

95 Scopus citations
2008

MicroRNA-183 family conservation and ciliated neurosensory organ expression

Pierce, M. L., Weston, M. D., Fritzsch, B., Gabel, H. W., Ruvkun, G. & Soukup, G. A., Jan 1 2008, In : Evolution and Development. 10, 1, p. 106-113 8 p.

Research output: Contribution to journalArticle

116 Scopus citations

Regenerating cochlear hair cells: Quo vadis stem cell

Beisel, K., Hansen, L., Soukup, G. & Fritzsch, B., Sep 1 2008, In : Cell and Tissue Research. 333, 3, p. 373-379 7 p.

Research output: Contribution to journalShort survey

33 Scopus citations

Stem cells and molecular strategies to restore hearing

Pauley, S., Kopecky, B., Beisel, K., Soukup, G. & Fritzsch, B., Mar 1 2008, In : Panminerva Medica. 50, 1, p. 41-53 13 p.

Research output: Contribution to journalReview article

39 Scopus citations
2007

Molecular evolution of the vertebrate mechanosensory cell and ear

Fritzsch, B., Beisel, K. W., Pauley, S. & Soukup, G., 2007, In : International Journal of Developmental Biology. 51, 6-7, p. 663-678 16 p.

Research output: Contribution to journalReview article

81 Scopus citations
2006

Backbone and nucleobase contacts to glucosamine-6-phosphate in the glmS ribozyme

Jansen, J. A., McCarthy, T. J., Soukup, G. A. & Soukup, J. K., Jun 26 2006, In : Nature Structural and Molecular Biology. 13, 6, p. 517-523 7 p.

Research output: Contribution to journalArticle

50 Scopus citations

Core requirements for glmS ribozyme self-cleavage reveal a putative pseudoknot structure

Soukup, G. A., Mar 20 2006, In : Nucleic Acids Research. 34, 3, p. 968-975 8 p.

Research output: Contribution to journalArticle

26 Scopus citations

Ligand Requirements for glmS Ribozyme Self-Cleavage (DOI:10.1016/j.chembiol.2005.09.006)

McCarthy, T. J., Plog, M. A., Floy, S. A., Jansen, J. A., Soukup, J. K. & Soukup, G. A., Jun 1 2006, In : Chemistry and Biology. 13, 6, 1 p.

Research output: Contribution to journalComment/debate

MicroRNA gene expression in the mouse inner ear

Weston, M. D., Pierce, M. L., Rocha-Sanchez, S., Beisel, K. W. & Soukup, G. A., Sep 21 2006, In : Brain Research. 1111, 1, p. 95-104 10 p.

Research output: Contribution to journalArticle

150 Scopus citations
2005

Ligand requirements for glmS ribozyme self-cleavage

McCarthy, T. J., Plog, M. A., Floy, S. A., Jansen, J. A., Soukup, J. K. & Soukup, G. A., Nov 2005, In : Chemistry and Biology. 12, 11, p. 1221-1226 6 p.

Research output: Contribution to journalArticle

105 Scopus citations
2004

Aptamers meet allostery

Soukup, G. A., Aug 2004, In : Chemistry and Biology. 11, 8, p. 1031-1032 2 p.

Research output: Contribution to journalReview article

5 Scopus citations

Riboswitches exert genetic control through metabolite-induced conformational change

Soukup, J. K. & Soukup, G. A., Jun 1 2004, In : Current Opinion in Structural Biology. 14, 3, p. 344-349 6 p.

Research output: Contribution to journalReview article

69 Scopus citations
2003

Engineered catalytic RNA and DNA: New biochemical tools for drug discovery and design

Steele, D., Kertsburg, A. & Soukup, G. A., Jun 9 2003, In : American Journal of PharmacoGenomics. 3, 2, p. 131-144 14 p.

Research output: Contribution to journalReview article

18 Scopus citations
2002

A versatile communication module for controlling RNA folding and catalysis

Kertsburg, A. & Soukup, G. A., Nov 1 2002, In : Nucleic Acids Research. 30, 21, p. 4599-4606 8 p.

Research output: Contribution to journalArticle

46 Scopus citations
2001

Cooperative binding of effectors by an allosteric ribozyme

Jose, A. M., Soukup, G. A. & Breaker, R. R., Apr 1 2001, In : Nucleic Acids Research. 29, 7, p. 1631-1637 7 p.

Research output: Contribution to journalArticle

72 Scopus citations

Generating new ligand-binding RNAs by affinity maturation and disintegration of allosteric ribozymes

Soukup, G. A., Derose, E. C., Koizumi, M. & Breaker, R. R., May 20 2001, In : RNA. 7, 4, p. 524-536 13 p.

Research output: Contribution to journalArticle

60 Scopus citations
2000

Allosteric nucleic acid catalysts

Soukup, G. A. & Breaker, R. R., Jun 1 2000, In : Current Opinion in Structural Biology. 10, 3, p. 318-325 8 p.

Research output: Contribution to journalReview article

115 Scopus citations

Altering molecular recognition of RNA aptamers by allosteric selection

Soukup, G. A., Emilsson, G. A. M. & Breaker, R. R., May 12 2000, In : Journal of Molecular Biology. 298, 4, p. 623-632 10 p.

Research output: Contribution to journalArticle

92 Scopus citations
1999

Allosteric ribozymes sensitive to the second messengers cAMP and cGMP.

Koizumi, M., Kerr, J. N., Soukup, G. A. & Breaker, R. R., 1999, In : Nucleic acids symposium series. 42, p. 275-276 2 p.

Research output: Contribution to journalArticle

11 Scopus citations

Allosteric selection of ribozymes that respond to the second messengers cGMP and cAMP

Koizumi, M., Soukup, G. A., Kerr, J. N. Q. & Breaker, R. R., Nov 17 1999, In : Nature Structural Biology. 6, 11, p. 1062-1071 10 p.

Research output: Contribution to journalArticle

152 Scopus citations

Design of allosteric hammerhead ribozymes activated by ligand-induced structure stabilization

Soukup, G. A. & Breaker, R. R., Jul 15 1999, In : Structure. 7, 7, p. 783-791 9 p.

Research output: Contribution to journalArticle

73 Scopus citations

Engineering precision RNA molecular switches

Soukup, G. A. & Breaker, R. R., Mar 30 1999, In : Proceedings of the National Academy of Sciences of the United States of America. 96, 7, p. 3584-3589 6 p.

Research output: Contribution to journalArticle

265 Scopus citations

Nucleic acid molecular switches

Soukup, G. A. & Breaker, R. R., Dec 1 1999, In : Trends in Biotechnology. 17, 12, p. 469-476 8 p.

Research output: Contribution to journalReview article

122 Scopus citations

Relationship between internucleotide linkage geometry and the stability of RNA

Soukup, G. A. & Breaker, R. R., Oct 1 1999, In : RNA. 5, 10, p. 1308-1325 18 p.

Research output: Contribution to journalArticle

407 Scopus citations
1998

Selection and characterization of RNAs that relieve transcriptional interference in Escherichia coli

Soukup, G. A. & Maher, L. J., Jun 1 1998, In : Nucleic Acids Research. 26, 11, p. 2715-2722 8 p.

Research output: Contribution to journalArticle

7 Scopus citations
1996

Selection of RNAs that bind to duplex DNA at neutral pH

Soukup, G. A., Ellington, A. D. & Maher, L. J., Jun 7 1996, In : Journal of Molecular Biology. 259, 2, p. 216-228 13 p.

Research output: Contribution to journalArticle

22 Scopus citations
1995

Preparation of Oligonucleotide-Biotin Conjugates with Cleavable Linkers

Soukup, G. A., Maher, L. J. & Cerny, R. L., 1995, In : Bioconjugate Chemistry. 6, 1, p. 135-138 4 p.

Research output: Contribution to journalArticle

16 Scopus citations