Gene Expression Profile of the Mouse Organ of Corti at the Onset of Hearing

Celine Pompeia, Belen Hurle, Inna A. Belyantseva, Konrad Noben-Trauth, Kirk Beisel, James Gao, Patee Buchoff, Graeme Wistow, Bechara Kachar

Research output: Contribution to journalArticle

12 Citations (Scopus)

Abstract

We describe the generation of an expressed sequence tag (EST) database of the mouse organ of Corti (OC). Over 20,000 independent clones were isolated, analyzed, and grouped into 8690 unique gene clusters. A large pool of novel genes unique to the OC was identified. Sequence alignments frequently revealed alternatively spliced forms of known genes potentially relevant in the OC function. We have also electronically mapped a subset of OC mouse ESTs to several syntenic regions associated with human autosomal and recessive deafness, which may prove useful for the identification of new positional candidates for these human diseases. The EST dataset is available as an interactive Web-based public database at http://neibank.nei.nih.gov. This resource provides both a view of the profile of gene expression in the OC at the onset of hearing and a tool to identify novel genes of importance in hearing.

Original languageEnglish
Pages (from-to)1000-1011
Number of pages12
JournalGenomics
Volume83
Issue number6
DOIs
StatePublished - Jun 2004

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Organ of Corti
Transcriptome
Hearing
Expressed Sequence Tags
Databases
Gene Pool
Sequence Alignment
Multigene Family
Genes
Clone Cells

All Science Journal Classification (ASJC) codes

  • Genetics

Cite this

Pompeia, C., Hurle, B., Belyantseva, I. A., Noben-Trauth, K., Beisel, K., Gao, J., ... Kachar, B. (2004). Gene Expression Profile of the Mouse Organ of Corti at the Onset of Hearing. Genomics, 83(6), 1000-1011. https://doi.org/10.1016/j.ygeno.2004.01.005

Gene Expression Profile of the Mouse Organ of Corti at the Onset of Hearing. / Pompeia, Celine; Hurle, Belen; Belyantseva, Inna A.; Noben-Trauth, Konrad; Beisel, Kirk; Gao, James; Buchoff, Patee; Wistow, Graeme; Kachar, Bechara.

In: Genomics, Vol. 83, No. 6, 06.2004, p. 1000-1011.

Research output: Contribution to journalArticle

Pompeia, C, Hurle, B, Belyantseva, IA, Noben-Trauth, K, Beisel, K, Gao, J, Buchoff, P, Wistow, G & Kachar, B 2004, 'Gene Expression Profile of the Mouse Organ of Corti at the Onset of Hearing', Genomics, vol. 83, no. 6, pp. 1000-1011. https://doi.org/10.1016/j.ygeno.2004.01.005
Pompeia C, Hurle B, Belyantseva IA, Noben-Trauth K, Beisel K, Gao J et al. Gene Expression Profile of the Mouse Organ of Corti at the Onset of Hearing. Genomics. 2004 Jun;83(6):1000-1011. https://doi.org/10.1016/j.ygeno.2004.01.005
Pompeia, Celine ; Hurle, Belen ; Belyantseva, Inna A. ; Noben-Trauth, Konrad ; Beisel, Kirk ; Gao, James ; Buchoff, Patee ; Wistow, Graeme ; Kachar, Bechara. / Gene Expression Profile of the Mouse Organ of Corti at the Onset of Hearing. In: Genomics. 2004 ; Vol. 83, No. 6. pp. 1000-1011.
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